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authorChristian C <cc@localhost>2024-11-11 12:29:32 -0800
committerChristian C <cc@localhost>2024-11-11 12:29:32 -0800
commitb85ee9d64a536937912544c7bbd5b98b635b7e8d (patch)
treecef7bc17d7b29f40fc6b1867d0ce0a742d5583d0 /code/sunlab/environment
Initial commit
Diffstat (limited to 'code/sunlab/environment')
-rw-r--r--code/sunlab/environment/base/__init__.py8
-rw-r--r--code/sunlab/environment/base/cpu.py4
-rw-r--r--code/sunlab/environment/base/cuda.py4
-rw-r--r--code/sunlab/environment/base/extras.py7
-rw-r--r--code/sunlab/environment/base/fortran.py8
5 files changed, 31 insertions, 0 deletions
diff --git a/code/sunlab/environment/base/__init__.py b/code/sunlab/environment/base/__init__.py
new file mode 100644
index 0000000..5fc27c1
--- /dev/null
+++ b/code/sunlab/environment/base/__init__.py
@@ -0,0 +1,8 @@
+import numpy as np
+import pandas as pd
+from matplotlib import pyplot as plt
+from copy import deepcopy as dc
+import glob
+from tqdm.notebook import tqdm
+from sunlab.common.mathlib.base import *
+from .fortran import *
diff --git a/code/sunlab/environment/base/cpu.py b/code/sunlab/environment/base/cpu.py
new file mode 100644
index 0000000..d969bd1
--- /dev/null
+++ b/code/sunlab/environment/base/cpu.py
@@ -0,0 +1,4 @@
+import os
+
+os.environ["CUDA_VISIBLE_DEVICES"] = "-1"
+from . import *
diff --git a/code/sunlab/environment/base/cuda.py b/code/sunlab/environment/base/cuda.py
new file mode 100644
index 0000000..a5c813e
--- /dev/null
+++ b/code/sunlab/environment/base/cuda.py
@@ -0,0 +1,4 @@
+import os
+
+os.environ["CUDA_VISIBLE_DEVICES"] = "1"
+from . import *
diff --git a/code/sunlab/environment/base/extras.py b/code/sunlab/environment/base/extras.py
new file mode 100644
index 0000000..b6ddc88
--- /dev/null
+++ b/code/sunlab/environment/base/extras.py
@@ -0,0 +1,7 @@
+from scipy.spatial import KDTree
+from scipy.spatial import ConvexHull
+from scipy.stats import linregress
+from sklearn.manifold import TSNE
+from sklearn.decomposition import PCA, KernelPCA
+from sklearn.cluster import KMeans
+from scipy.optimize import curve_fit
diff --git a/code/sunlab/environment/base/fortran.py b/code/sunlab/environment/base/fortran.py
new file mode 100644
index 0000000..973d09a
--- /dev/null
+++ b/code/sunlab/environment/base/fortran.py
@@ -0,0 +1,8 @@
+try:
+ from ...fortran_src.aae_flib_mamba import *
+except Exception:
+ ...
+try:
+ from ...fortran_src.aae_flib_tfnb import *
+except Exception:
+ ...